Here's the setup:

Yep, it's a bit informal.

You'll notice that there's no focusing mechanism in sight. That's because it's inside the big black lens: a Canon macro EF 100mm 1:2.8 L IS USM, internal focus, being driven by Canon EOS Utility. The camera is Canon T1i in Live View and hence EFSC (electronic first shutter curtain). There's a Nikon CFI60 10X NA 0.25 objective stuck on front of the 100mm, hiding behind the chunk of paper towel that's shading the objective from glare that would otherwise come around the subject.
62 frames with a focus step of 2 <<. That means two presses of EOS Utility's "<<" button, followed by pressing EOS Utility's shutter release.
Ambient continuous lighting (daylight, looking out through a patio door), 1.3 seconds at ISO 200. I fouled up and left the 100mm set at f/4 instead of opening up to its full f/2.8, so I got a little more vignetting than I should have. Not worth reshooting, though.
I was pleasantly surprised by how little trouble there was with vibration in this "setup". Nothing was fastened down and the table was in use by two people typing on laptops. The Live View was remarkably stable, and the actual exposures bore that out: 5X on sensor, sharp at actual pixels with a 1.3 second exposure. I think this is a case of camera and subject moving in unison. Certainly things were moving, since when I took the first few test exposures, the subject slid sideways every time the mirror cycled. That stopped after I tightened up a couple of the pins, and then there were no further problems.
Here's the full frame.

100% actual pixels crop -- no sharpening or levels adjustment, straight out of Zerene Stacker DMap.

A single source frame:

Hope you find this interesting!
--Rik