Yes, they are cross-polarized. I wrote an article on Micscape about my setup that you can find here
http://www.microscopy-uk.org.uk/mag/ind ... polar.htmlI am using two circular polarizers. The top one is the analyzer. The one on the light source is the polarizer. It does matter that the polarizers agree. In other words, if the light is going through the analyzer at the non-thread side, then the polarizer should also be aligned with th thread side up. But, at times, I may flip the polarizer to see what effect that will have.
Then I have a polarizer on the left eyepiece to examine the specimen slide. I usually have to rotate the polarizer when I view and shoot in the camera. I am now using an Olympus E-330 which has Live View from the sensor and an articulated screen. Olympus Live View has a 7x magnified view so I can fine focus. I also stop the condenser diaphragm almost all of the way down for deeper depth of field and to accomodate field flatness.
Mike