NU,
The CS5 interface does take a bit of getting used to! (especially if you skipped CS3 and CS4)
One of the things that can be annoying (at least at first) is the opening of multiple images as "tabs". Fortunately you can set this aspect to function as the older versions:
Edit=>
Preferences =>
Interface... un-check the box "Open Documents as Tabs"
Close the program and then restart. Now documents will open in their own windows as with older versions pf PS.
As you've discovered, this model of the Olympus trinocular tube has a diameter that will only permit the (very narrow) Olympus photo-eyepieces to seat in the proper location. Since the way you are set-up you do not use the narrow dovetail at the top of the trinocular tube to mount the camera, it might be a simple matter to remove the dovetail (four screws I think) and use a flat plate in it's place that might allow the Nikon CF eyepiece to sit at the proper height. (... don't know.... never tried it.... just a thought...

). However, based on the images you've shown us here I don't know if it would be worth the extra effort.
You will undoubtedly get some unwanted CA using the Olympus NFK's with the Nikon CF objective. But I would think that the type of "introduced" CA would be of a nature that can be quite effectively corrected in PS itself, or with a plug-in like the excellent PTLens. I think you have clearly demonstrated that here, the results look excellent! (Frankly, these look about as "clean" as I get with the Olympus 60/1.40 S Plan Apo + NFK).
I would be curious to know if you get decent DIC with this objective if you use the 100X prism in the condenser. (Sometimes other "brands" work nicely, sometimes
not so nicely).
(FWIW the Olympus 60/1.40 S Plan Apo was the hardest one for me to find... and when I did find a "mint" one, it cost me more than any other objective I have!
)